I am trying to install hpctoolkit
using Spack
. In order to do that, I executed :
git clone https://github.com/spack/spack.git
cd spack/share/spack
source setup-env.sh
spack fetch -D hpctoolkit
spack install hpctoolkit
I can't execute the last command because I get the following error:
Error: ProcessError: Command exited with status 1:
'./bootstrap.sh' '--prefix=/home/hakim/spack/opt/spack/linux-ubuntu20.04-haswell/gcc-10.2.0/boost-1.76.0-oc2u6jxritfsbci4xkhr5lov3i4o4riq' '--with-toolset=gcc' '--with-libraries=serialization,atomic,log,exception,regex,math,random,program_options,wave,iostreams,chrono,system,test,graph,locale,timer,filesystem,date_time,thread' '--without-icu'
It recommended me to take a look at build log by displaying the following message:
See build log for details:
/tmp/hakim/spack-stage/spack-stage-boost-1.76.0-oc2u6jxritfsbci4xkhr5lov3i4o4riq/spack-build-out.txt
and the previous file contains:
A C++11 capable compiler is required for building the B2 engine.
Toolset 'gcc' does not appear to support C++11.
> g++ -x c++ -std=c++11 check_cxx11.cpp
ERROR: Compiler '[email protected]' does not support compiling C++ programs.
In order to display the compilers, I used the command:
spack compiler list
and the result is:
==> Available compilers
-- clang ubuntu20.04-x86_64 -------------------------------------
[email protected] [email protected]
-- gcc ubuntu20.04-x86_64 ---------------------------------------
[email protected] [email protected]
In order to get rid of the version '[email protected]', I modified compilers.yaml which is a separate file to store information about available compilers.
In my case, I did:
cd ~/.spack/linux
emacs compilers.yaml &
and found (I'm displaying only the part related to the gcc compiler):
compilers:
- compiler:
spec: [email protected]
paths:
cc: /usr/bin/gcc-7
cxx: null
f77: /usr/bin/gfortran-7
fc: /usr/bin/gfortran-7
flags: {}
operating_system: ubuntu20.04
target: x86_64
modules: []
environment: {}
extra_rpaths: []
- compiler:
spec: [email protected]
paths:
cc: /usr/bin/gcc-9
cxx: null
f77: /usr/bin/gfortran-9
fc: /usr/bin/gfortran-9
flags: {}
operating_system: ubuntu20.04
target: x86_64
modules: []
environment: {}
extra_rpaths: []
In order to get rid of [email protected], I just deleted its part. I verify now the list of compilers and I should find:
-- clang ubuntu20.04-x86_64 -------------------------------------
[email protected] [email protected]
-- gcc ubuntu20.04-x86_64 ---------------------------------------
[email protected]
And now, when I execute the command:
spack install hpctoolkit
the error is different. I get :
=> Error: CompilerAccessError: Compiler '[email protected]' has executables that are missing or are not executable: ['/usr/bin/gfortran-7', '/usr/bin/gfortran-7']
/home/hakim/spack/lib/spack/spack/build_environment.py:937, in _setup_pkg_and_run:
934 tb_string = traceback.format_exc()
935
936 # build up some context from the offending package so we can
>> 937 # show that, too.
938 package_context = get_package_context(tb)
939
940 logfile = None
==> Error: hpctoolkit-2021.05.15-jkofhcw73pap6ciacwcv2mtcv6uf3n2e: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).
I think the [email protected] compiler has been wrongly installed since he tells me that it has executables that are missing or are not executable.
I tried with [email protected], [email protected] and [email protected] but in vain .. (I want to mention that all the compilers are installed in /usr/bin
)
Any help, please ?